PiErow, the purpose of breaking in brushes is to get a 'square' block to wear down to a good 'fit' on a round commutator. I can't imagine how anyone could expect to get it right with a Dremel without some sort of computer guidance.
There's also the water break-in, running it under water at half voltage. The water keeps it cool, keeps it under load, and also flushes out the dust.
It needs to be thoroughly blown out and lubed after this process.
Some people swear by this, and others won't even attempt it. I saw that process demonstrated on DIY channel's R/C Hobbies show.